Links and General Information
Below you can find usefull links to:
- Spectra viewers
- Fluorophore/ fluorescent protein databases
- Microscopy learning websites
- Imaging/ image analysis software
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Spectra viewers
Use these spectra viewers to select appropriate combinations of fluorophores for imaging and to check their behavior with respect to present illumination light source and bandwidth of emission filter.
Thermo Fisher Fluorescence SpectraViewer
Chroma Spectra Viewer
Zeiss Filter Assistant
FP Base Spectra
Fluorophore/ fluorescent protein databases
FPbase
Fluorophores
Comprehensive learning websites for all aspects of microscopy
Molecular Expressions Website
iBiology Microscopy Series
https://www.ibiology.org/online-biology-courses/microscopy-series/
Scientific Community Image Forum
Nikon MicroscopyU
Olympus Microscopy Resource Center
http://www.olympusconfocal.com/gfp/
Zeiss Education in Microscopy and Digital Imaging
http://zeiss-campus.magnet.fsu.edu/
Thermo Fisher Fluorescence Tutorials
https://www.thermofisher.com/de/de/home/support/tutorials.html
Leica Science Lab
https://www.leica-microsystems.com/science-lab/
Microscopist
Microscopy imaging software and open source image analysis
NEUBIAS - Network of european bioimage analysts Youtube channel
https://www.youtube.com/channel/UC-oy7UpEhRfHQ-5ePCviKFg
NIS-Elements Viewer
https://www.microscope.healthcare.nikon.com/de_EU/products/software/nis-elements/viewer
NIS-Elements (Ver. 4.50) User’s Guide
https://www.gvsu.edu/cms4/asset/8FCAC028-902A-3EFC-5137403A360C8843/user_guide_nis-elements_ar.pdf
Fiji
Fiji macro language - NEUBIAS academy online cours
https://www.youtube.com/watch?v=o8tfkdcd3DA
Cell Profiler
Misc
Fileserver: OMERO.web application for your browser
http://s-mfag-omer01.charite.de/webclient/login/?url=%2Fwebclient%2F
Fileserver: OMERO.insight client
https://www.openmicroscopy.org/omero/downloads/
Bioimage Informatics Search Engine (BISE)